PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0002s0086.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 308aa    MW: 33719.5 Da    PI: 6.7452
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0002s0086.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.48.9e-3045102155
              G2-like   1 kprlrWtpeLHerFveaveqLGGse...kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kprlrWt +LHerFv+av qLGG++   +AtPk+i+++m+vkgLtl h+kSHLQkYRl
  Kalax.0002s0086.1.p  45 KPRLRWTADLHERFVDAVGQLGGPNiftEATPKAIMRTMGVKGLTLFHLKSHLQKYRL 102
                          79*********************965558****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-2842103IPR009057Homeodomain-like
SuperFamilySSF466894.48E-1545104IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-2045103IPR006447Myb domain, plants
PfamPF002492.9E-747101IPR001005SANT/Myb domain
PfamPF143793.9E-15143187IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MFPLLMQPHD GGLTPLGHGR DDIHGIGVCS YGVGDPCLVL TSDPKPRLRW TADLHERFVD  60
AVGQLGGPNI FTEATPKAIM RTMGVKGLTL FHLKSHLQKY RLGKQSGKDM CDIVKDGSYL  120
IEVPESNNSA PKLLTPDTNE GFEVKEALRA QMEVQSKLHL QVEAEKHLQI RQDAERRYMA  180
MLDRACRMLA DHYVGGAVID ADKDKSQCMD AKKLPSMSFF THDTVPSYTL QPSTTAGLHG  240
LEELLPGLHT QRADCSTESC LTSHDSSAGS RKRMLHADSV AQYLLWGEAN MAMPNVSVSQ  300
GIAGYST*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224659.11e-125PREDICTED: myb family transcription factor APL-like isoform X1
SwissprotQ9SAK52e-47APL_ARATH; Myb family transcription factor APL
TrEMBLM5WGF61e-124M5WGF6_PRUPE; Myb family transcription factor APL
STRINGGLYMA09G02030.11e-121(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.14e-62G2-like family protein